Alumni

Juliana Saragiotto Silva

Post doctoral researcher

From July, 2015 to March, 2017
 
 

PROJECT
Identification of patterns in biological data by applying Social Network Analysis metrics
RESEARCH INTERESTS
• Social Network Analysis
• Interaction Networks
• Biodiversity Informatics
• Bioinformatics
 
SHORT CV
Education
1996-2000 B.Sc. in Computer Science, Federal University of Mato Grosso (UFMT)
2006-2008 M.Sc. in Science and Technology Policy, State University of Campinas
2009-2014 Ph.D. in Electrical Engineering, Computer Engineering Area, University of
São Paulo (USP), Brazil
Career
2004 Systems Analyst, Health Department of Mato Grosso State (SES-MT), Brazil
2008 Professor, Federal Institute of Mato Grosso (IFMT), Brazil
2014 Visiting Professor, Research Center on Biodiversity and Computing
(BioComp), University of São Paulo (USP), Brazil
2015 Postdoc, Biosciences Institute (IB), University of São Paulo (USP), Brazil
SELECTED PUBLICATIONS
STOPPE, N.C.; SILVA, J.S.; TORRES, T.T.; CARLOS, C.; HACHICH, E.M.; SATO, M.I.Z.; SARAIVA, A.M.; OTTOBONI, L.M.M. 2014. Clustering of water bodies in unpolluted and polluted environments based on Escherichia coli phylogroup abundance using a simple interaction database. Genetics and Molecular Biology, 37(4): 694-701.
 
SILVA, J.S.; STOPPE, N.C.; TORRES, T.T.; OTTOBONI, L.M.M.; SARAIVA, A.M. 2014. Social Network Analysis Metrics and Their Application in Microbiological Network Studies. In: 5th International Workshop on Complex (CompleNet2014), 2014, Bologna, Italy. Proceedings of the 5th Workshop on Complex Networks CompleNet 2014, Studies in Computational Intelligence, 2014 (v. 549): 251-260.
 
SILVA, J.S.; SARAIVA, A.M. 2013. Metodologia para aplicação de métricas de Análise de Redes Sociais em biodiversidade. In: IX Congresso Brasileiro de Agroinformática (SBIAgro 2013), 2013, Cuiabá, MT. Anais do SBIAgro 2013.

Gisele Antoniazzi Cardoso

PhD candidate

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
 
 

PROJECT
Survey of species-specific expression levels of genes involved in feeding behavior in the Calliphoridae family
 
RESEARCH INTERESTS
• Feeding behavior
• Gene Expression
• Molecular Biology
 
SHORT CV
Education
2006-2009 B.Sc. in Biomedical Science, Faculdade Integrada Metropolitana de
Campinas, Brazil
2010-2012 MSc. in Genetics and Molecular Biology, State University of Campinas,
Brazil
2014 PhD in Genetics, Departamento de Genética e Biologia Evolutiva, Instituto
de Biociências, São Paulo University, São Paulo, Brazil (in progress)
PUBLICATIONS
Cardoso, G.A; Marinho, M.A.T.; Azeredo-Espin, A.M.L.; Torres, T.T. 2013. Evolution of expression levels of genes involved in the feeding habit of Calliphoridae species. In preparation.
 
Cardoso, G.A; Matiolli, C.C.; Azeredo-Espin, A.M.L.; Torres, T.T. 2014. Selection and validation of reference genes for functional studies in the Calliphoridae family. Journal of Insect Science, 14:1-15.

Gustavo Amaral Faria

MSc student

Departamento de Biologia Animal, Instituto de Biologia, Unicamp, Campinas, Brazil
Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
 
 

PROJECT
Comparison of species-specific expression levels of genes involved in feeding behavior in species of the Calliphoridae family
Supervisor: Prof. Patrícia Thyssen
 
RESEARCH INTERESTS
• Feeding behaviour
• Gene expression
• Forensic entomology
 

SHORT CV
Education
2012-2016 B.Sc. in Biology, Universidade Paulista, Brazil.
2017 MSc. in Animal Biology, State University of Campinas, Brazil (in progress). (in progress)
PUBLICATIONS

Raquel Dietsche Monfardini

MSc student

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
 
 

PROJECT
Evolution of the control pathways of tissue development in Diptera
 
RESEARCH INTERESTS
• Molecular Biology
• Gene evolution
• Gene expression
 
SHORT CV
Education
2011-2015 B.Sc. in Biology, University of São Paulo, Brazil
2014 MSc. in Genetics, Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil (in progress)
PUBLICATIONS

 

Marina Santos Deszo

MSc student

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
 
 

PROJECT
Characterization and comparative analysis of the bot fly transcriptome
 
RESEARCH INTERESTS
• Molecular Biology
• Gene expression
• Bioinformatics
 
SHORT CV
Education
2011-2015 B.Sc. in Biology, University of São Paulo, Brazil
2014 MSc. in Genetics, Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil (in progress)
PUBLICATIONS

Valeria Lis Le Gal

MSc student

From August, 2013 to March, 2016
 
 

PROJECT
Molecular Basis of Pesticide Resistance in Ripicephalus microplus
SHORT CV
Education
2001-2011 B.Sc. in Genetics, Universidad Nacional de Misiones – Argentina
2012-2013 Research scholarship Carrillo-Oñativia from Ministerio de Salud de la
Nación- Argentina: Identification of species of the Anopheles albitarsis
complex by molecular tools, in the south of the Province of Misiones-
Argentina
2013-2017 MSc. in Biology (Genetics), University of São Paulo, Brazil

Sophie Tandonnet

MSc student

From July, 2012 to August, 2014
 
 

PROJECT
Molecular bases of pesticide resistance in Cochliomyia hominivorax (Diptera: Calliphoridae)
SHORT CV
Education
2008-2011 B.Sc in Biology, Université de Limoges, France
2010-2011 Foreign exchange (Erasmus program) in Biology of Organisms and
Populations, Universidad de Alicante, Spain
2011-2014 Research Master in Ecology and Biology of Populations (option Biology,
Ecology and Evolution), Université de Poitiers, France

Carla A. S. Santos Chibante

Information Technitian

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
 
 

PROJECT

 

RESEARCH INTERESTS
• Development
• Gene expression
 
SHORT CV
Education

Juliana Correa Neiva Ferreira

Undergraduate student

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil

PROJECT
Evolution of sequence and expression of the Olfactory Receptors (ORs) related to feeding habits in the Calliphoridae family

RESEARCH INTERESTS
• Gene evolution
• Gene expression

SHORT CV
Education
2015 B.Sc. in Biomedicine, University of São Paulo, Brazil (in progress)

Fabrício Caio Leotti

Undergraduate student

From February, 2012 to July, 2013
 
 

PROJECT
Repetitive Content of Cochliomyia hominivorax genome

Carolina Sconfienza Faria

Undergraduate student

From August, 2011 to June, 2012
 
 

PROJECT
Insecticide resistance in Cochliomyia hominivorax (Diptera: Calliphoridae)

Nancy de Castro Stoppe

Researcher

Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, São Paulo University, São Paulo, Brazil
Research Center on Biodiversity and Computing (BioComp-USP), São Paulo University, São Paulo, Brazil

PROJECT
Markers prospection for contamination source tracking on superficial waters in São Paulo State

RESEARCH INTERESTS
• Environmental Microbiology
• Molecular Biology and Genetics of Microorganisms
• Quality Control and Quality Assurance in Microbiology Laboratories

SHORT CV
Education
1981-1984 B.Sc. in Biology, University of São Paulo, Brazil
1986-1989 MSc. in Genetics, State University of Campinas, Brazil
2010-2014 PhD in Genetics and Molecular Biology, State University of Campinas,
Brazil
Carrer
1989-2008 Biologist, CETESB – Environmental Agency of São Paulo State, Brazil
2008-2010 Technological and Industrial Development Fellowship, CETESB
Environmental Agency of São Paulo State, Brazil

PUBLICATIONS
MARTINS, M. T. ; SATO, M. I. Z. ; ALVES, M. N. ; STOPPE, N.C. ; PRADO, V. M. ; SANCHEZ, P. S. . Assessment of microbiological quality for swimming pools in South America. Water Research, 29: 2417-20, 1995.

ORSI, R.H.; STOPPE, N.C.; SATO, M.I.Z.; GOMES, T.A.T.; PRADO, P.I.; MANFIO, G.P.; OTTOBONI, L.M.M. Genetic variability and pathogenicity potential of Escherichia coli isolated from recreational water reservoirs. Research in Microbiology, 158: 420-7, 2007.

CARLOS, C.; PIRES, M.M.; STOPPE, N.C.; HACHICH, E.M.; SATO, M.I.Z.; AMARAL, T.A.T.G.; AMARAL, L.A.; OTTOBONI, L.M.M. Escherichia coli phylogenetic group determination and application in the identification of the major animal source of fecal contamination. BMC Microbiology, 10: 161, 2010.

Sophie Tandonnet

Post-doctoral researcher

From July, 2012 to August, 2014

PROJECT
Molecular bases of pesticide resistance in Cochliomyia hominivorax (Diptera: Calliphoridae)
SHORT CV
Education
2008-2011 B.Sc in Biology, Université de Limoges, France
2010-2011 Foreign exchange (Erasmus program) in Biology of Organisms and
Populations, Universidad de Alicante, Spain
2011-2014 Research Master in Ecology and Biology of Populations (option Biology,
Ecology and Evolution), Université de Poitiers, France